In this study, the electrochemical characteristics of fuel cell were evaluated after applying a compressive load to the activation area of membrane electrode assembly (MEA) in polymer electrolyte membrane fuel cells. The effects of the pressed area under the compressive load were systematically investigated using polarization curves and electrochemical impedance spectroscopies (EIS) of the fuel cell. Interestingly, the performance of the fuel cell was improved as the pressed area of the MEA was increased from 25.2% to 100% of the active area. In addition, the increased pressed area led to a decrease in the ohmic resistance and the activation resistance of fuel cells.